ALP User Documentation 0.7.alpha
Algebraic Programming User Documentation
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simple_pagerank.hpp
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1
2/*
3 * Copyright 2021 Huawei Technologies Co., Ltd.
4 *
5 * Licensed under the Apache License, Version 2.0 (the "License");
6 * you may not use this file except in compliance with the License.
7 * You may obtain a copy of the License at
8 *
9 * http://www.apache.org/licenses/LICENSE-2.0
10 *
11 * Unless required by applicable law or agreed to in writing, software
12 * distributed under the License is distributed on an "AS IS" BASIS,
13 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 * See the License for the specific language governing permissions and
15 * limitations under the License.
16 */
17
27#ifndef _H_GRB_PAGERANK
28#define _H_GRB_PAGERANK
29
30#include <graphblas.hpp>
31
32#ifndef _GRB_NO_STDIO
33#include <iostream>
34#endif
35
36
37namespace grb {
38
39 namespace algorithms {
40
130 template<
132 typename IOType, typename NonzeroT
133 >
136 const Matrix< NonzeroT > &L,
137 Vector< IOType > &pr_next,
138 Vector< IOType > &pr_nextnext,
139 Vector< IOType > &row_sum,
140 const IOType alpha = 0.85,
141 const IOType conv = 0.0000001,
142 const size_t max = 1000,
143 size_t * const iterations = nullptr,
144 double * const quality = nullptr
145 ) {
149 > addM;
153 > realRing;
154#ifdef _DEBUG
155 const auto s = spmd<>::pid();
156#endif
157 const size_t n = nrows( L );
158 const IOType zero = realRing.template getZero< IOType >();
159
160 // runtime sanity checks
161 {
162 if( n != ncols( L ) ) {
163 return ILLEGAL;
164 }
165 if( size( pr ) != n ) {
166 return MISMATCH;
167 }
168 if( size( pr ) != n ) {
169 return MISMATCH;
170 }
171 if( size( pr_next ) != n ||
172 size( pr_nextnext ) != n ||
173 size( row_sum ) != n
174 ) {
175 return MISMATCH;
176 }
177 if( capacity( pr ) != n ) {
178 return ILLEGAL;
179 }
180 if( capacity( pr_next ) != n ||
181 capacity( pr_nextnext ) != n ||
182 capacity( row_sum ) != n
183 ) {
184 return ILLEGAL;
185 }
186 // alpha must be within 0 and 1 (both exclusive)
187 if( alpha <= 0 || alpha >= 1 ) {
188 return ILLEGAL;
189 }
190 // max must be larger than 0
191 if( max <= 0 ) {
192 return ILLEGAL;
193 }
194 }
195
196 // running error code
197 RC ret = SUCCESS;
198
199 // make initial guess if the user did not make one
200 if( nnz( pr ) != n ) {
201 ret = set( pr, static_cast< IOType >( 1 ) / static_cast< IOType >( n ) );
202 assert( ret == SUCCESS );
203 }
204
205 // initialise all temporary vectors to default dense values
206 ret = ret ? ret : set( pr_nextnext, zero );
207 assert( ret == SUCCESS );
208
209 // calculate row sums
210 Semiring<
215 > pattern_ring;
216
217 ret = ret ? ret : set( pr_next, 1 ); // abuses pr_next as temporary vector
218 ret = ret ? ret : set( row_sum, 0 );
219 ret = ret ? ret :
220 vxm< descr | descriptors::dense | descriptors::transpose_matrix >(
221 row_sum, pr_next, L, pattern_ring
222 );
223 // pr_next is now free for further use
224 assert( ret == SUCCESS );
225
226#ifdef _DEBUG
227 std::cout << "Prelude to iteration 0:\n";
228 (void) eWiseLambda(
229 [ &row_sum, &pr_next, &pr ]( const size_t i ) {
230 #pragma omp critical
231 {
232 std::cout << i << ": " << row_sum[ i ] << "\t" << pr[ i ] << "\t"
233 << pr_next[ i ] << "\n";
234 }
235 },
236 pr, pr_next, row_sum );
237#endif
238
239 // calculate in-place the inverse of row sums, and keep zero if dangling
240 // this eWiseLambda is always supported since alpha is read-only
241 ret = ret ? ret : eWiseLambda(
242 [ &row_sum, &alpha, &zero ]( const size_t i ) {
243 assert( row_sum[ i ] >= zero );
244 if( row_sum[ i ] > zero ) {
245 row_sum[ i ] = alpha / row_sum[ i ];
246 }
247 },
248 row_sum
249 );
250 assert( ret == SUCCESS );
251
252#ifdef _DEBUG
253 std::cout << "Row sum array:\n";
254 (void) eWiseLambda(
255 [ &row_sum ]( const size_t i ) {
256 #pragma omp critical
257 std::cout << i << ": " << row_sum[ i ] << "\n";
258 }, row_sum
259 );
260#endif
261
262 // some control variables
263 size_t iter = 0; //#iterations, initalise to zero
264 IOType dangling = zero; // used for caching the contribution of random jumps
265 // from dangling nodes
266 IOType residual = zero; // declare residual (computed inside the do-while
267 // loop)
268
269 // main loop
270 do {
271 // reset iteration-local values
272 residual = dangling = 0;
273
274#ifdef _DEBUG
275 std::cout << "Current PR array:\n";
276 (void) eWiseLambda(
277 [ &pr ]( const size_t i ) {
278 #pragma omp critical
279 if( i < 8 ) {
280 std::cout << i << ": " << pr[ i ] << "\n";
281 }
282 }, pr
283 );
284#endif
285
286 // calculate dangling factor and do scaling
287 if( ret == SUCCESS ) {
288 // can we reduce via lambdas?
289 if( Properties<>::writableCaptured ) {
290 // yes we can, so save one unnecessary stream on pr
291 ret = eWiseLambda(
292 [ &pr_next, &row_sum, &dangling, &pr ]( const size_t i ) {
293 // calculate dangling contribution
294 if( row_sum[ i ] == 0 ) {
295 dangling += pr[ i ];
296 pr_next[ i ] = 0;
297 } else {
298 // pre-scale input
299 pr_next[ i ] = pr[ i ] * row_sum[ i ];
300 }
301 }, row_sum, pr, pr_next
302 );
303 // allreduce dangling factor
304 assert( ret == SUCCESS );
305 ret = ret ? ret : grb::collectives<>::allreduce(
306 dangling,
308 );
309 assert( ret == SUCCESS );
310 } else {
311 // otherwise we have to handle the reduction separately
312 ret = foldl< grb::descriptors::invert_mask >(
313 dangling, pr, row_sum, addM
314 );
315 assert( ret == SUCCESS );
316
317 // separately from the element-wise multiplication here
318 ret = ret ? ret : set( pr_next, 0 );
319 ret = ret ? ret : eWiseApply(
320 pr_next, pr, row_sum,
322 );
323 assert( ret == SUCCESS );
324 }
325 }
326
327#if defined _DEBUG && defined _GRB_WITH_LPF
328 for( size_t dbg = 0; dbg < spmd<>::nprocs(); ++dbg ) {
329 const auto s = spmd<>::pid();
330 if( dbg == s ) {
331 std::cout << "Next PR array (under construction):\n";
333 [ &pr_next, s ]( const size_t i ) {
334 #pragma omp critical
335 if( i < 10 ) {
336 std::cout << i << ", " << s << ": " << pr_next[ i ] << "\n";
337 }
338 },
339 pr_next );
340 }
341 spmd<>::sync();
342 }
343#endif
344
345 if( ret == SUCCESS ) {
346#ifdef _DEBUG
347 std::cout << s << ": dangling (1) = " << dangling << "\n";
348#endif
349
350 // complete dangling factor
351 dangling = ( alpha * dangling + 1 - alpha ) / static_cast< IOType >( n );
352
353#ifdef _DEBUG
354 std::cout << s << ": dangling (2) = " << dangling << "\n";
355#endif
356 }
357
358 // multiply with row-normalised link matrix (no change to dangling rows)
359 // note that the later eWiseLambda requires the output be dense
360 ret = ret ? ret : set( pr_nextnext, 0 ); assert( ret == SUCCESS );
361 ret = ret ? ret : vxm< descr >( pr_nextnext, pr_next, L, realRing );
362 assert( ret == SUCCESS );
363 assert( n == grb::nnz( pr_nextnext ) );
364
365#if defined _DEBUG && defined _GRB_WITH_LPF
366 for( size_t dbg = 0; dbg < spmd<>::nprocs(); ++dbg ) {
367 if( dbg == s ) {
368 std::cout << s << ": nextnext PR array (after vxm):\n";
369 (void) eWiseLambda(
370 [ &pr_nextnext, s ]( const size_t i ) {
371 #pragma omp critical
372 if( i < 10 )
373 std::cout << i << ", " << s << ": " << pr_nextnext[ i ] << "\n";
374 }, pr_nextnext
375 );
376 }
377 (void) spmd<>::sync();
378 }
379 for( size_t k = 0; k < spmd<>::nprocs(); ++k ) {
380 if( spmd<>::pid() == k ) {
381 std::cout << "old pr \t scaled input \t alpha * pr * H at PID "
382 << k << "\n";
383 (void) eWiseLambda(
384 [ &pr, &pr_next, &pr_nextnext ]( const size_t i ) {
385 #pragma omp critical
386 {
387 std::cout << pr[ i ] << "\t" << pr_next[ i ] << "\t"
388 << pr_nextnext[ i ] << "\n";
389 }
390 }, pr, pr_next, pr_nextnext
391 );
392 }
393 (void) spmd<>::sync();
394 }
395#endif
396
397 // calculate & normalise new pr and calculate residual
398 if( ret == SUCCESS ) {
399 // can we reduce via lambdas?
400 if( grb::Properties<>::writableCaptured ) {
401 // yes, we can. So update pr[ i ] and calculate residual simultaneously
402 ret = eWiseLambda(
403 [ &pr, &pr_nextnext, &dangling, &residual, &zero ]( const size_t i ) {
404 // cache old pagerank vector
405 const IOType oldval = pr[ i ];
406 // set new pagerank vector
407 pr[ i ] = pr_nextnext[ i ] + dangling;
408 // update residual
409 if( oldval > pr[ i ] ) {
410 residual += oldval - pr[ i ];
411 } else {
412 residual += pr[ i ] - oldval;
413 }
414 pr_nextnext[ i ] = zero;
415 }, pr, pr_nextnext
416 );
417 // reduce process-local residual
418 assert( ret == SUCCESS );
419 if( ret == SUCCESS ) {
421 residual,
423 );
424 }
425 assert( ret == SUCCESS );
426 } else {
427 // we cannot reduce via lambdas, so calculate new pr vector
428 ret = foldl< descriptors::dense >( pr_nextnext, dangling, addM );
429 assert( ret == SUCCESS );
430 // do a dot product under the one-norm ``ring''
431 if( ret == SUCCESS ) {
432 residual = zero;
433 ret = dot< descriptors::dense >(
434 residual,
435 pr, pr_nextnext,
437 );
438 assert( ret == SUCCESS );
439 }
440 if( ret == SUCCESS ) {
441 // next pr vector becomes current pr vector
442 std::swap( pr, pr_nextnext );
443 }
444 }
445 }
446
447 // update iteration count
448 ++iter;
449
450 // check convergence
451 if( conv != zero && residual <= conv ) { break; }
452
453#ifdef _DEBUG
454 if( grb::spmd<>::pid() == 0 ) {
455 std::cout << "Iteration " << iter << ", "
456 << "residual = " << residual << std::endl;
457 }
458#endif
459
460 } while( ret == SUCCESS && iter < max );
461
462 // check if the user requested any stats, and output if yes
463 if( iterations != nullptr ) {
464 *iterations = iter;
465 }
466 if( quality != nullptr ) {
467 *quality = residual;
468 }
469
470 // return the appropriate exit code
471 if( ret != SUCCESS ) {
472 if( spmd<>::pid() == 0 ) {
473 std::cerr << "Error while running simple pagerank algorithm: "
474 << toString( ret ) << "\n";
475 }
476 return ret;
477 } else if( residual <= conv ) {
478#ifdef _DEBUG
479 if( spmd<>::pid() == 0 ) {
480 std::cerr << "Info: simple pagerank converged after " << iter
481 << " iterations.\n";
482 }
483#endif
484 return SUCCESS; // converged!
485 } else {
486#ifdef _DEBUG
487 if( spmd<>::pid() == 0 ) {
488 std::cout << "Info: simple pagerank did not converge after "
489 << iter << " iterations.\n";
490 }
491#endif
492 return FAILED; // not converged
493 }
494 }
495
496 } // namespace algorithms
497
498} // namespace grb
499
500#endif // end _H_GRB_PAGERANK
501
An ALP/GraphBLAS matrix.
Definition: matrix.hpp:71
A generalised monoid.
Definition: monoid.hpp:54
A generalised semiring.
Definition: semiring.hpp:186
A GraphBLAS vector.
Definition: vector.hpp:64
static RC allreduce(IOType &inout, const Operator op=Operator())
Schedules an allreduce operation of a single object of type IOType per process.
Definition: collectives.hpp:121
Standard identity for the logical AND operator.
Definition: identities.hpp:178
Standard identity for numerical multiplication.
Definition: identities.hpp:79
Standard identity for numerical addition.
Definition: identities.hpp:57
This operator returns the absolute difference between two numbers.
Definition: ops.hpp:542
This operator takes the sum of the two input parameters and writes it to the output variable.
Definition: ops.hpp:174
This operator assigns the left-hand input if the right-hand input evaluates true.
Definition: ops.hpp:88
This operator multiplies the two input parameters and writes the result to the output variable.
Definition: ops.hpp:208
For backends that support multiple user processes this class defines some basic primitives to support...
Definition: spmd.hpp:51
static size_t pid() noexcept
Definition: spmd.hpp:61
The main header to include in order to use the ALP/GraphBLAS API.
RC eWiseApply(Vector< OutputType, backend, Coords > &z, const InputType1 alpha, const InputType2 beta, const OP &op=OP(), const Phase &phase=EXECUTE, const typename std::enable_if< !grb::is_object< OutputType >::value &&!grb::is_object< InputType1 >::value &&!grb::is_object< InputType2 >::value &&grb::is_operator< OP >::value, void >::type *const =nullptr)
Computes , out of place, operator version.
Definition: blas1.hpp:206
RC eWiseLambda(const Func f, const Vector< DataType, backend, Coords > &x, Args...)
Executes an arbitrary element-wise user-defined function f using any number of vectors of equal lengt...
Definition: blas1.hpp:3524
size_t capacity(const Vector< InputType, backend, Coords > &x) noexcept
Queries the capacity of the given ALP/GraphBLAS container.
Definition: io.hpp:388
RC set(Vector< DataType, backend, Coords > &x, const T val, const Phase &phase=EXECUTE, const typename std::enable_if< !grb::is_object< DataType >::value &&!grb::is_object< T >::value, void >::type *const =nullptr) noexcept
Sets all elements of a vector to the given value.
Definition: io.hpp:857
size_t nrows(const Matrix< InputType, backend, RIT, CIT, NIT > &A) noexcept
Requests the row size of a given matrix.
Definition: io.hpp:286
size_t nnz(const Vector< DataType, backend, Coords > &x) noexcept
Request the number of nonzeroes in a given vector.
Definition: io.hpp:479
size_t ncols(const Matrix< InputType, backend, RIT, CIT, NIT > &A) noexcept
Requests the column size of a given matrix.
Definition: io.hpp:339
size_t size(const Vector< DataType, backend, Coords > &x) noexcept
Request the size of a given vector.
Definition: io.hpp:235
RC simple_pagerank(Vector< IOType > &pr, const Matrix< NonzeroT > &L, Vector< IOType > &pr_next, Vector< IOType > &pr_nextnext, Vector< IOType > &row_sum, const IOType alpha=0.85, const IOType conv=0.0000001, const size_t max=1000, size_t *const iterations=nullptr, double *const quality=nullptr)
The canonical PageRank algorithm.
Definition: simple_pagerank.hpp:134
static constexpr Descriptor no_operation
Indicates no additional pre- or post-processing on any of the GraphBLAS function arguments.
Definition: descriptors.hpp:63
The ALP/GraphBLAS namespace.
Definition: graphblas.hpp:450
std::string toString(const RC code)
RC
Return codes of ALP primitives.
Definition: rc.hpp:47
@ ILLEGAL
A call to a primitive has determined that one of its arguments was illegal as per the specification o...
Definition: rc.hpp:143
@ MISMATCH
One or more of the ALP/GraphBLAS objects passed to the primitive that returned this error have mismat...
Definition: rc.hpp:90
@ SUCCESS
Indicates the primitive has executed successfully.
Definition: rc.hpp:54
@ FAILED
Indicates when one of the grb::algorithms has failed to achieve its intended result,...
Definition: rc.hpp:154
unsigned int Descriptor
Descriptors indicate pre- or post-processing for some or all of the arguments to an ALP/GraphBLAS cal...
Definition: descriptors.hpp:54